黄瓜硫酸盐转运蛋白家族成员的鉴定与表达分析

赵 闻,廖伟民,赵金栋,刁慧贞,江孟涛,蒋伦伟

激光生物学报 ›› 2022, Vol. 31 ›› Issue (4) : 353-360.

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激光生物学报 ›› 2022, Vol. 31 ›› Issue (4) : 353-360.
研究论文

黄瓜硫酸盐转运蛋白家族成员的鉴定与表达分析

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Identification and Expression Analysis of Sulfate Transporter Family Members in Cucumber

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摘要

摘 要:硫是植物生长发育的一种必需营养元素,主要以SO42-的形式被植物吸收。硫酸盐转运蛋白(SULTR)在植物吸收与转运硫的过程中发挥着重要的作用。本研究鉴定得到10个黄瓜SULTR基因家族成员(CsaSULTR1;1~CsaSULTR4;1)。系统发育分析结果表明,黄瓜和拟南芥的SULTR可分为GROUP 1~4四个类群。大多数CsaSULTR基因含9~12个内含子,且亲缘关系相近的成员之间基因结构也十分相似。启动子顺式元件分析预测表明,CsaSULTR基因家族成员均包含与激素应答和胁迫相关的作用元件,表明它们可能在生长发育过程中发挥了主要作用。转录组数据表达分析也表明,CsaSULTR基因在各种组织间都存在着比较突出的表达特异性,且部分基因的表达量在霜霉病胁迫下表现出显著的改变。这些结果为下一步研究黄瓜SULTR基因的功能奠定了重要的基础。
关键词:黄瓜;SULTR基因家族;进化分析;转录组数据;霜霉病
中图分类号:Q751                               文献标志码:A                    DOI:10.3969/j.issn.1007-7146.2022.04.009

Abstract

Abstract: Sulfur is an essential macronutrient for plant growth and development, and sulfate transporter (SULTR) plays key roles in sulfate (SO42-) uptake and transport in higher plants. In this study, 10 SULTR genes (CsaSULTR1;1~CsaSULTR4;1) were identified in cucumber. Phylogenetic analysis showed that SULTRs from cucumber and Arabidopsis could be divided into four groups (GROUP 1~4). Most CsaSULTR genes contained 9~12 introns, and closely related members shared similar gene structures. Promoter analysis revealed that CsaSULTR genes may be involved in responses to hormones and environmental stress. Expression profiling analysis by RNA-seq indicated that CsaSULTR genes have distinct expression patterns in different tissues, and some of them had significantly changed expression in response to downy mildew infection. Our results provide a better understanding for further functional analysis of CsSULTR genes in cucumber.
Keywords: cucumber; SULTR gene family; phylogenetic analysis; transcriptome data; downy mildew
(Acta Laser Biology Sinica, 2022, 31(4): 353-360)

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赵 闻,廖伟民,赵金栋,刁慧贞,江孟涛,蒋伦伟. 黄瓜硫酸盐转运蛋白家族成员的鉴定与表达分析[J]. 激光生物学报. 2022, 31(4): 353-360
ZHAO Wen, LIAO Weimin, ZHAO Jindong, DIAO Huizhen, JIANG Mengtao, JIANG Lunwei. Identification and Expression Analysis of Sulfate Transporter Family Members in Cucumber[J]. Acta Laser Biology Sinica. 2022, 31(4): 353-360

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