摘要
人髓样分化因子88(MyD88)属于Toll样受体和IL1受体家族成员下游的炎症信号通路的中心因子。为了研究人MyD88的蛋白结构和功能,本文利用重要数据库进行了生物信息学分析。研究表明,人MyD88基因全长为5 670 bp,位于染色体3p22.2,共编码296个氨基酸。人MyD88蛋白具有较高的保守性,其等电点为5.64,不存在信号肽,并且含有2个苏木化位点、15个丝氨酸磷酸化位点、6个苏氨酸磷酸化位点和4个酪氨酸磷酸化位点。该蛋白主要定位在细胞核和细胞质中,而且在血液、脾脏和肺较多,其二级结构含有145个α螺旋和30个β折叠,拉曼图表明三级结构模型A是可信的。与人MyD88相互作用的蛋白主要是Toll样受体和白介素相关蛋白,并且参与炎症反应、细胞凋亡等重要的免疫过程。本研究为阐明人MyD88基因结构特点和生物学功能奠定了理论基础,也为其相关疾病诊断和治疗提供了新思路。
Abstract
Human myeloid differentiation factor 88 (MyD88) is the central factor for inflammatory signaling pathways downstream of members of the Tolllike receptor (TLR) and interleukin1 (IL1) receptor families. To explore the human MyD88 structures and functions by bioinformatics analysis, results showed human MyD88 gene of full length 5 670 bp, located on chromosome 3p22.2, and encoded 296 amino acids, which was a higher conserved one. Meanwhile, human MyD88 was highly distributed in the blood, spleen and lung, with no signal peptides, whereas it included 2 sumolation sites and 15 serine phosphorylation sites, 6 threonine phosphorylation sites and 4 tyrosine phosphorylation sites. The secondary structure was mainly consisted of 145 αhelix and 30 βsheet regions, indicating that the tertiary structure was reliable by ramachandran plot. In addition, human MyD88 also has protein interaction with Tolllike receptors and interleukins, participating in inflammatory reaction, cell apoptosis and other immunologic processes. All together, our bioinformatics analysis would provide a basis for understanding structure features and biological functions of human MyD88, guiding a new schema for the diagnosis and treatment in the future.
王 道,施晓波,陈建林.
人髓样分化因子88的生物信息学分析[J]. 激光生物学报. 2020, 29(3): 252-259
Bioinformatics Analysis of MyD88 in Human[J]. Acta Laser Biology Sinica. 2020, 29(3): 252-259
{{custom_sec.title}}
{{custom_sec.title}}
{{custom_sec.content}}